Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
APOC4P55056 CYP46A4P-201ENST00000414953 267 ntBASIC10.72□□□□□ -0.69
APOC4P55056 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AL645933.1-201ENST00000440087 609 ntBASIC10.72□□□□□ -0.69
APOC4P55056 AL353637.1-201ENST00000451571 732 ntBASIC10.72□□□□□ -0.69
APOC4P55056 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 POU5F1P2-201ENST00000521750 823 ntBASIC10.72□□□□□ -0.69
APOC4P55056 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.72□□□□□ -0.69
APOC4P55056 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 MIR4783-201ENST00000580343 82 ntBASIC10.72□□□□□ -0.69
APOC4P55056 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 AC138627.1-207ENST00000641560 1006 ntBASIC10.72□□□□□ -0.69
APOC4P55056 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.72□□□□□ -0.69
APOC4P55056 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
APOC4P55056 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
APOC4P55056 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.71□□□□□ -0.69
APOC4P55056 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
APOC4P55056 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
APOC4P55056 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.71□□□□□ -0.69
APOC4P55056 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.71□□□□□ -0.69
APOC4P55056 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
APOC4P55056 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.71□□□□□ -0.69
APOC4P55056 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 FAM90A7P-201ENST00000382628 1395 ntBASIC10.71□□□□□ -0.69
APOC4P55056 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 FAM90A23P-201ENST00000400136 1395 ntBASIC10.71□□□□□ -0.69
APOC4P55056 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.71□□□□□ -0.69
APOC4P55056 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
APOC4P55056 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.71□□□□□ -0.69
APOC4P55056 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOC4P55056 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.71□□□□□ -0.69
APOC4P55056 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.71□□□□□ -0.69
APOC4P55056 KRT8P28-201ENST00000433288 1390 ntBASIC10.71□□□□□ -0.69
APOC4P55056 VDAC1P1-201ENST00000439229 848 ntBASIC10.71□□□□□ -0.69
APOC4P55056 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.71□□□□□ -0.69
APOC4P55056 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms