Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
KRT6CP48668 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.25□□□□□ -0.13
KRT6CP48668 AL355864.2-201ENST00000447420 863 ntBASIC14.25□□□□□ -0.13
KRT6CP48668 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.25□□□□□ -0.13
KRT6CP48668 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.25□□□□□ -0.13
KRT6CP48668 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
KRT6CP48668 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
KRT6CP48668 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 AC011474.4-201ENST00000623523 2076 ntBASIC14.25□□□□□ -0.13
KRT6CP48668 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT6CP48668 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT6CP48668 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT6CP48668 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 AP000593.2-201ENST00000542775 1433 ntBASIC14.24□□□□□ -0.13
KRT6CP48668 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 KHSRPP1-201ENST00000427983 1768 ntBASIC14.24□□□□□ -0.13
KRT6CP48668 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KRT6CP48668 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6CP48668 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6CP48668 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6CP48668 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6CP48668 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6CP48668 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KRT6CP48668 AC132938.4-201ENST00000623835 848 ntBASIC14.24□□□□□ -0.13
KRT6CP48668 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6CP48668 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6CP48668 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms