Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDKN1AP38936 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDKN1AP38936 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDKN1AP38936 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 LINC00528-201ENST00000600723 2160 ntBASIC12.53□□□□□ -0.4
CDKN1AP38936 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 TLE1P1-201ENST00000422965 589 ntBASIC12.53□□□□□ -0.4
CDKN1AP38936 FGFR3P1-201ENST00000449999 601 ntBASIC12.53□□□□□ -0.4
CDKN1AP38936 CEP164P1-201ENST00000455142 418 ntBASIC12.53□□□□□ -0.4
CDKN1AP38936 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.53□□□□□ -0.4
CDKN1AP38936 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.53□□□□□ -0.4
CDKN1AP38936 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CDKN1AP38936 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.53□□□□□ -0.4
CDKN1AP38936 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 AC013726.1-201ENST00000563747 2285 ntBASIC12.53□□□□□ -0.4
CDKN1AP38936 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDKN1AP38936 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.52□□□□□ -0.4
CDKN1AP38936 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.52□□□□□ -0.4
CDKN1AP38936 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.52□□□□□ -0.4
CDKN1AP38936 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CDKN1AP38936 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 SSR4P1-203ENST00000599569 2260 ntBASIC12.52□□□□□ -0.41
CDKN1AP38936 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms