Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.73□□□□□ -0.05
LTBRP36941 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.73□□□□□ -0.05
LTBRP36941 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.73□□□□□ -0.05
LTBRP36941 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.73□□□□□ -0.05
LTBRP36941 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.73□□□□□ -0.05
LTBRP36941 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.73□□□□□ -0.05
LTBRP36941 MIR4746-201ENST00000579802 71 ntBASIC14.73□□□□□ -0.05
LTBRP36941 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 AC080013.5-201ENST00000607044 679 ntBASIC14.73□□□□□ -0.05
LTBRP36941 AL591424.3-201ENST00000614278 872 ntBASIC14.73□□□□□ -0.05
LTBRP36941 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.73□□□□□ -0.05
LTBRP36941 AC026336.4-201ENST00000624565 1050 ntBASIC14.73□□□□□ -0.05
LTBRP36941 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LTBRP36941 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 AC007952.5-201ENST00000572818 1486 ntBASIC14.72□□□□□ -0.05
LTBRP36941 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
LTBRP36941 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.72□□□□□ -0.05
LTBRP36941 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.72□□□□□ -0.05
LTBRP36941 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.72□□□□□ -0.05
LTBRP36941 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 CTBP2P6-201ENST00000526402 1229 ntBASIC14.72□□□□□ -0.05
LTBRP36941 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.72□□□□□ -0.05
LTBRP36941 AC004801.1-201ENST00000549557 360 ntBASIC14.72□□□□□ -0.05
LTBRP36941 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 AC079414.2-201ENST00000567157 1104 ntBASIC14.72□□□□□ -0.05
LTBRP36941 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 TBC1D27-202ENST00000424239 1573 ntBASIC14.72□□□□□ -0.05
LTBRP36941 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LTBRP36941 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBRP36941 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBRP36941 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBRP36941 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 AC020931.1-201ENST00000589622 1346 ntBASIC14.71□□□□□ -0.05
LTBRP36941 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
LTBRP36941 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBRP36941 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBRP36941 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBRP36941 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBRP36941 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LTBRP36941 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBRP36941 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBRP36941 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LTBRP36941 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms