Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KRT20P35900 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT20P35900 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT20P35900 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT20P35900 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT20P35900 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT20P35900 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KRT20P35900 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
KRT20P35900 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.02□□□□□ -0.16
KRT20P35900 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
KRT20P35900 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT20P35900 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.02□□□□□ -0.16
KRT20P35900 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT20P35900 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KRT20P35900 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT20P35900 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT20P35900 KRT43P-201ENST00000434019 910 ntBASIC14.02□□□□□ -0.17
KRT20P35900 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 GIMAP3P-201ENST00000495150 836 ntBASIC14.02□□□□□ -0.17
KRT20P35900 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.02□□□□□ -0.17
KRT20P35900 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 CR383656.12-201ENST00000549567 513 ntBASIC14.02□□□□□ -0.17
KRT20P35900 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT20P35900 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
KRT20P35900 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
KRT20P35900 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.02□□□□□ -0.17
KRT20P35900 AL022328.1-201ENST00000610050 478 ntBASIC14.02□□□□□ -0.17
KRT20P35900 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
KRT20P35900 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT20P35900 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 AL137783.1-201ENST00000623494 1896 ntBASIC14.01□□□□□ -0.17
KRT20P35900 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
KRT20P35900 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
KRT20P35900 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KRT20P35900 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
KRT20P35900 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.01□□□□□ -0.17
KRT20P35900 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 HLA-K-203ENST00000430151 1046 ntBASIC14.01□□□□□ -0.17
KRT20P35900 C2orf27AP3-201ENST00000434123 579 ntBASIC14.01□□□□□ -0.17
KRT20P35900 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.01□□□□□ -0.17
KRT20P35900 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT20P35900 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.01□□□□□ -0.17
KRT20P35900 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.01□□□□□ -0.17
KRT20P35900 AC132938.2-201ENST00000579188 680 ntBASIC14.01□□□□□ -0.17
KRT20P35900 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms