Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.37■□□□□ 0.21
CIITAP33076 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.37■□□□□ 0.21
CIITAP33076 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.37■□□□□ 0.21
CIITAP33076 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CIITAP33076 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.37■□□□□ 0.21
CIITAP33076 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CIITAP33076 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.37■□□□□ 0.21
CIITAP33076 AC091544.8-201ENST00000619490 361 ntBASIC16.37■□□□□ 0.21
CIITAP33076 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.37■□□□□ 0.21
CIITAP33076 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.37■□□□□ 0.21
CIITAP33076 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.37■□□□□ 0.21
CIITAP33076 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.37■□□□□ 0.21
CIITAP33076 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 LINC01165-201ENST00000445190 1623 ntBASIC16.37■□□□□ 0.21
CIITAP33076 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CIITAP33076 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 AC008132.1-202ENST00000342005 1389 ntBASIC16.37■□□□□ 0.21
CIITAP33076 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CIITAP33076 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
CIITAP33076 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CIITAP33076 MIR600HG-201ENST00000449175 5984 ntBASIC16.36■□□□□ 0.21
CIITAP33076 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 AC020910.6-201ENST00000623084 1459 ntBASIC16.36■□□□□ 0.21
CIITAP33076 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CIITAP33076 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.36■□□□□ 0.21
CIITAP33076 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.36■□□□□ 0.21
CIITAP33076 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CIITAP33076 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 ISCA2P1-201ENST00000425548 448 ntBASIC16.36■□□□□ 0.21
CIITAP33076 AC024681.1-201ENST00000521917 487 ntBASIC16.36■□□□□ 0.21
CIITAP33076 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.36■□□□□ 0.21
CIITAP33076 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.36■□□□□ 0.21
CIITAP33076 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CIITAP33076 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CIITAP33076 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.35■□□□□ 0.21
CIITAP33076 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.35■□□□□ 0.21
CIITAP33076 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.35■□□□□ 0.21
CIITAP33076 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.35■□□□□ 0.21
CIITAP33076 AC140658.4-201ENST00000561990 352 ntBASIC16.35■□□□□ 0.21
CIITAP33076 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.35■□□□□ 0.21
CIITAP33076 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.35■□□□□ 0.21
CIITAP33076 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.35■□□□□ 0.21
CIITAP33076 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.35■□□□□ 0.21
CIITAP33076 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.35■□□□□ 0.21
CIITAP33076 AC138627.1-207ENST00000641560 1006 ntBASIC16.35■□□□□ 0.21
CIITAP33076 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
CIITAP33076 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CIITAP33076 AC012617.1-204ENST00000586340 2305 ntBASIC16.35■□□□□ 0.21
CIITAP33076 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CIITAP33076 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.35■□□□□ 0.21
CIITAP33076 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms