Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.37□□□□□ -0.43
COL8A2P25067 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.37□□□□□ -0.43
COL8A2P25067 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.37□□□□□ -0.43
COL8A2P25067 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
COL8A2P25067 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.37□□□□□ -0.43
COL8A2P25067 MIR3619-201ENST00000579667 83 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.37□□□□□ -0.43
COL8A2P25067 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 AC097724.1-201ENST00000609581 426 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 AC138627.1-207ENST00000641560 1006 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.37□□□□□ -0.43
COL8A2P25067 AC144522.1-201ENST00000625111 1658 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
COL8A2P25067 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.37□□□□□ -0.43
COL8A2P25067 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL8A2P25067 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 AC006504.5-208ENST00000588784 2401 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 AC008132.1-202ENST00000342005 1389 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 MYO15B-237ENST00000642007 4893 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
COL8A2P25067 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
COL8A2P25067 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.36□□□□□ -0.43
COL8A2P25067 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 AL133466.1-201ENST00000447582 150 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.36□□□□□ -0.43
COL8A2P25067 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 AC012618.1-201ENST00000461223 412 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 AC009779.1-201ENST00000551138 283 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 RBM8B-201ENST00000555532 525 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.36□□□□□ -0.43
COL8A2P25067 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.36□□□□□ -0.43
COL8A2P25067 AL132994.2-201ENST00000603120 687 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 AP000346.4-201ENST00000614827 381 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 CU633904.3-201ENST00000624042 1029 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 TMBIM7P-202ENST00000641474 1516 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 AC232323.1-201ENST00000540724 2099 ntBASIC12.36□□□□□ -0.43
COL8A2P25067 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL8A2P25067 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.36□□□□□ -0.43
COL8A2P25067 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.36□□□□□ -0.43
COL8A2P25067 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms