Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
APPP05067 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.61■□□□□ 0.41
APPP05067 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.61■□□□□ 0.41
APPP05067 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.61■□□□□ 0.41
APPP05067 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.61■□□□□ 0.41
APPP05067 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
APPP05067 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 GPR182-203ENST00000622922 591 ntBASIC17.61■□□□□ 0.41
APPP05067 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.61■□□□□ 0.41
APPP05067 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
APPP05067 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
APPP05067 KRT8P29-201ENST00000420409 1371 ntBASIC17.61■□□□□ 0.41
APPP05067 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.61■□□□□ 0.41
APPP05067 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC018735.1-201ENST00000437208 1502 ntBASIC17.61■□□□□ 0.41
APPP05067 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
APPP05067 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
APPP05067 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APPP05067 AC139712.1-201ENST00000378256 1875 ntBASIC17.61■□□□□ 0.41
APPP05067 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.6■□□□□ 0.41
APPP05067 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.6■□□□□ 0.41
APPP05067 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.6■□□□□ 0.41
APPP05067 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.6■□□□□ 0.41
APPP05067 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 MIR4525-201ENST00000580000 75 ntBASIC17.6■□□□□ 0.41
APPP05067 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.6■□□□□ 0.41
APPP05067 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
APPP05067 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.6■□□□□ 0.41
APPP05067 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.6■□□□□ 0.41
APPP05067 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
APPP05067 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.6■□□□□ 0.41
APPP05067 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
APPP05067 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.6■□□□□ 0.41
APPP05067 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APPP05067 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
APPP05067 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
APPP05067 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.59■□□□□ 0.41
APPP05067 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.59■□□□□ 0.41
APPP05067 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 AC113367.3-201ENST00000508316 1912 ntBASIC17.59■□□□□ 0.41
APPP05067 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
APPP05067 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
APPP05067 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
APPP05067 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.59■□□□□ 0.41
APPP05067 KLF2P1-201ENST00000447438 1042 ntBASIC17.59■□□□□ 0.41
APPP05067 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.59■□□□□ 0.41
APPP05067 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APPP05067 AC103988.2-201ENST00000561804 725 ntBASIC17.59■□□□□ 0.41
APPP05067 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms