Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 STRCP1-201ENST00000509801 5328 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDRT1O95170 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.12□□□□□ -0.31
CDRT1O95170 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 RN7SL618P-201ENST00000477850 296 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 AC069262.1-201ENST00000539058 672 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.12□□□□□ -0.31
CDRT1O95170 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.12□□□□□ -0.31
CDRT1O95170 TEX28P1-201ENST00000613479 1221 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 TEX28P2-201ENST00000617764 1221 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 SPDYE12P-201ENST00000618416 771 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.12□□□□□ -0.31
CDRT1O95170 AL109936.8-201ENST00000641772 604 ntBASIC13.12□□□□□ -0.31
CDRT1O95170 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDRT1O95170 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.11□□□□□ -0.31
CDRT1O95170 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 TOMM22P5-201ENST00000416399 439 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 CNN2P11-201ENST00000429351 262 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.11□□□□□ -0.31
CDRT1O95170 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.11□□□□□ -0.31
CDRT1O95170 AL512356.2-201ENST00000546955 174 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 AC051619.7-201ENST00000568314 623 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms