Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 AC092135.3-201ENST00000624151 1846 ntBASIC14.76□□□□□ -0.05
GPC4O75487 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 FO681548.1-201ENST00000455617 1132 ntBASIC14.76□□□□□ -0.05
GPC4O75487 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 FTH1P14-201ENST00000482930 551 ntBASIC14.76□□□□□ -0.05
GPC4O75487 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.76□□□□□ -0.05
GPC4O75487 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
GPC4O75487 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
GPC4O75487 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GPC4O75487 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GPC4O75487 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 AL359881.3-201ENST00000602640 1721 ntBASIC14.75□□□□□ -0.05
GPC4O75487 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GPC4O75487 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.75□□□□□ -0.05
GPC4O75487 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.75□□□□□ -0.05
GPC4O75487 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.75□□□□□ -0.05
GPC4O75487 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 TPT1P11-201ENST00000458482 498 ntBASIC14.75□□□□□ -0.05
GPC4O75487 MESTP3-201ENST00000503460 968 ntBASIC14.75□□□□□ -0.05
GPC4O75487 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.75□□□□□ -0.05
GPC4O75487 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.75□□□□□ -0.05
GPC4O75487 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.75□□□□□ -0.05
GPC4O75487 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GPC4O75487 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.75□□□□□ -0.05
GPC4O75487 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms