Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC114501.2-201ENST00000439631 535 ntBASIC11.5□□□□□ -0.57
ZNF253O75346 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC010327.4-202ENST00000591484 748 ntBASIC11.5□□□□□ -0.57
ZNF253O75346 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ZNF253O75346 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
ZNF253O75346 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
ZNF253O75346 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ZNF253O75346 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 KRT18P13-201ENST00000400056 1290 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 AC004945.1-201ENST00000416738 983 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 AL353779.1-201ENST00000434793 351 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 MEIS3P1-201ENST00000495167 958 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.49□□□□□ -0.57
ZNF253O75346 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.49□□□□□ -0.57
ZNF253O75346 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 AL158212.4-201ENST00000624062 1286 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms