Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 PYY2-201ENST00000315776 282 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 AP000356.3-201ENST00000382243 753 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.97■□□□□ 0.47
CACNA1FO60840 ERP29P1-201ENST00000442902 706 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.97■□□□□ 0.47
CACNA1FO60840 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.97■□□□□ 0.47
CACNA1FO60840 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.97■□□□□ 0.47
CACNA1FO60840 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 AC007881.3-201ENST00000608897 607 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.97■□□□□ 0.47
CACNA1FO60840 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CACNA1FO60840 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.96■□□□□ 0.47
CACNA1FO60840 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
CACNA1FO60840 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 RPS2P36-201ENST00000456516 831 ntBASIC17.96■□□□□ 0.47
CACNA1FO60840 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.96■□□□□ 0.47
CACNA1FO60840 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CACNA1FO60840 SIGLEC22P-201ENST00000599104 714 ntBASIC17.96■□□□□ 0.47
CACNA1FO60840 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.96■□□□□ 0.47
CACNA1FO60840 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.96■□□□□ 0.47
CACNA1FO60840 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CACNA1FO60840 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 INTS4P1-203ENST00000641008 3683 ntBASIC17.95■□□□□ 0.46
CACNA1FO60840 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 RPL3P2-204ENST00000413027 1203 ntBASIC17.95■□□□□ 0.46
CACNA1FO60840 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CACNA1FO60840 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CACNA1FO60840 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.95■□□□□ 0.46
CACNA1FO60840 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.95■□□□□ 0.46
CACNA1FO60840 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.95■□□□□ 0.46
CACNA1FO60840 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CACNA1FO60840 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.95■□□□□ 0.46
CACNA1FO60840 OR6D1P-202ENST00000641007 5290 ntBASIC17.95■□□□□ 0.46
CACNA1FO60840 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 AL391647.1-201ENST00000395664 511 ntBASIC17.95■□□□□ 0.46
CACNA1FO60840 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.95■□□□□ 0.46
CACNA1FO60840 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.95■□□□□ 0.46
CACNA1FO60840 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.95■□□□□ 0.46
CACNA1FO60840 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CACNA1FO60840 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CACNA1FO60840 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CACNA1FO60840 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.95■□□□□ 0.46
CACNA1FO60840 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.94■□□□□ 0.46
CACNA1FO60840 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CACNA1FO60840 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CACNA1FO60840 AC026748.1-201ENST00000624349 3251 ntBASIC17.94■□□□□ 0.46
CACNA1FO60840 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CACNA1FO60840 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CACNA1FO60840 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CACNA1FO60840 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CACNA1FO60840 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.94■□□□□ 0.46
CACNA1FO60840 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CACNA1FO60840 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms