Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
CHD2O14647 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.54■□□□□ 0.72
CHD2O14647 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD2O14647 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.54■□□□□ 0.72
CHD2O14647 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD2O14647 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHD2O14647 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD2O14647 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 MIR8071-1-201ENST00000616769 65 ntBASIC19.53■□□□□ 0.72
CHD2O14647 MIR8071-2-201ENST00000616772 65 ntBASIC19.53■□□□□ 0.72
CHD2O14647 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD2O14647 AC009041.4-201ENST00000620075 638 ntBASIC19.53■□□□□ 0.72
CHD2O14647 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.53■□□□□ 0.72
CHD2O14647 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHD2O14647 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD2O14647 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 AGAP7P-201ENST00000582299 2062 ntBASIC19.53■□□□□ 0.72
CHD2O14647 AGAP14-201ENST00000624701 2060 ntBASIC19.53■□□□□ 0.72
CHD2O14647 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD2O14647 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC19.53■□□□□ 0.72
CHD2O14647 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 AC053503.3-201ENST00000448375 114 ntBASIC19.53■□□□□ 0.72
CHD2O14647 RN7SL173P-201ENST00000461853 292 ntBASIC19.53■□□□□ 0.72
CHD2O14647 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD2O14647 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD2O14647 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD2O14647 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD2O14647 AC091951.1-201ENST00000512854 2465 ntBASIC19.52■□□□□ 0.72
CHD2O14647 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.52■□□□□ 0.72
CHD2O14647 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD2O14647 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 GH1-203ENST00000351388 685 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD2O14647 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 KRT18P15-201ENST00000458108 1291 ntBASIC19.52■□□□□ 0.72
CHD2O14647 MIR6893-201ENST00000613458 69 ntBASIC19.52■□□□□ 0.72
CHD2O14647 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD2O14647 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD2O14647 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD2O14647 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHD2O14647 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHD2O14647 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHD2O14647 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.52■□□□□ 0.71
CHD2O14647 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD2O14647 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD2O14647 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD2O14647 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CHD2O14647 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 MIR1307-201ENST00000408840 149 ntBASIC19.51■□□□□ 0.71
CHD2O14647 HMGA1P1-201ENST00000415560 1062 ntBASIC19.51■□□□□ 0.71
CHD2O14647 AC005722.1-201ENST00000431878 964 ntBASIC19.51■□□□□ 0.71
CHD2O14647 AL356000.1-201ENST00000441073 1238 ntBASIC19.51■□□□□ 0.71
CHD2O14647 KRT19P4-201ENST00000443208 943 ntBASIC19.51■□□□□ 0.71
CHD2O14647 AC022447.6-201ENST00000515522 438 ntBASIC19.51■□□□□ 0.71
CHD2O14647 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD2O14647 ABCC6P1-203ENST00000565566 1170 ntBASIC19.51■□□□□ 0.71
CHD2O14647 CCND3P2-201ENST00000579393 537 ntBASIC19.51■□□□□ 0.71
CHD2O14647 MIR6125-201ENST00000618986 96 ntBASIC19.51■□□□□ 0.71
CHD2O14647 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD2O14647 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD2O14647 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHD2O14647 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD2O14647 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD2O14647 MIR632-201ENST00000385193 94 ntBASIC19.51■□□□□ 0.71
CHD2O14647 OR7E155P-201ENST00000412208 1014 ntBASIC19.51■□□□□ 0.71
CHD2O14647 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms