Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RN7SL23P-201ENST00000484055 275 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 RNA5SP406-201ENST00000516106 112 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 CTBP2P8-201ENST00000422584 1330 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A21P-201ENST00000510875 1396 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A15P-201ENST00000514465 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A6P-201ENST00000515148 1394 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A16P-201ENST00000526662 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A9P-201ENST00000527940 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A5P-201ENST00000528738 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A14P-201ENST00000530386 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 FAM90A13P-201ENST00000534703 1395 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC068587.6-202ENST00000641839 5619 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 KRT17P4-201ENST00000429445 819 ntBASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC095040.1-201ENST00000513286 675 ntBASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 LINC00244-201ENST00000625073 613 ntBASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCFC2Q9Y5Z7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HCFC2Q9Y5Z7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 GNG10P1-201ENST00000452289 199 ntBASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 NDUFB10P1-201ENST00000567319 521 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms