Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL157414.3-201ENST00000624276 1954 ntBASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL080243.2-201ENST00000418783 582 ntBASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ALG1L5P-201ENST00000482043 771 ntBASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AL365181.3-201ENST00000605886 3222 ntBASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SND1-IT1Q9HBX3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 GPS2P2-201ENST00000430745 888 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms