Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 RNA5SP417-201ENST00000516459 108 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AC138701.2-201ENST00000553634 226 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 HERC2P11-201ENST00000562845 725 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AC100756.2-201ENST00000569537 736 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 MIR5001-201ENST00000580185 100 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 MARK2P16-201ENST00000605714 1723 ntBASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 RNA5SP359-201ENST00000364838 113 ntBASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AL157407.1-201ENST00000435784 904 ntBASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 AC133540.1-201ENST00000620845 1019 ntBASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ENPP7P8-202ENST00000527856 1345 ntBASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2OQ9C0C9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBE2OQ9C0C9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBE2OQ9C0C9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBE2OQ9C0C9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
UBE2OQ9C0C9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
UBE2OQ9C0C9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 AC090616.6-203ENST00000579186 1945 ntBASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.08■□□□□ 0.16
UBE2OQ9C0C9 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms