Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKP4Q99569 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PKP4Q99569 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKP4Q99569 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PKP4Q99569 LINC01230-201ENST00000625222 3017 ntBASIC14.27□□□□□ -0.12
PKP4Q99569 AC009093.10-201ENST00000641956 1442 ntBASIC14.27□□□□□ -0.12
PKP4Q99569 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKP4Q99569 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.27□□□□□ -0.12
PKP4Q99569 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PKP4Q99569 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.27□□□□□ -0.12
PKP4Q99569 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PKP4Q99569 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.27□□□□□ -0.13
PKP4Q99569 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.27□□□□□ -0.13
PKP4Q99569 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.27□□□□□ -0.13
PKP4Q99569 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.27□□□□□ -0.13
PKP4Q99569 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PKP4Q99569 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
PKP4Q99569 AC132192.2-201ENST00000596206 1147 ntBASIC14.27□□□□□ -0.13
PKP4Q99569 AC009955.4-201ENST00000597192 544 ntBASIC14.27□□□□□ -0.13
PKP4Q99569 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.27□□□□□ -0.13
PKP4Q99569 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PKP4Q99569 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PKP4Q99569 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PKP4Q99569 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PKP4Q99569 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.26□□□□□ -0.13
PKP4Q99569 AL583810.1-201ENST00000553344 1045 ntBASIC14.26□□□□□ -0.13
PKP4Q99569 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.26□□□□□ -0.13
PKP4Q99569 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.26□□□□□ -0.13
PKP4Q99569 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.26□□□□□ -0.13
PKP4Q99569 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.26□□□□□ -0.13
PKP4Q99569 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 AC027601.5-201ENST00000624065 2482 ntBASIC14.26□□□□□ -0.13
PKP4Q99569 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PKP4Q99569 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
PKP4Q99569 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKP4Q99569 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PKP4Q99569 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.25□□□□□ -0.13
PKP4Q99569 AC015818.8-201ENST00000587907 1519 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 AC152010.1-201ENST00000415779 2006 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms