Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SHC1P1-201ENST00000425230 1745 ntBASIC14.89□□□□□ -0.03
PHOX2BQ99453 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC013268.4-201ENST00000637413 2228 ntBASIC14.88□□□□□ -0.03
PHOX2BQ99453 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 RN7SL81P-201ENST00000493781 261 ntBASIC14.88□□□□□ -0.03
PHOX2BQ99453 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PHOX2BQ99453 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PHOX2BQ99453 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC112504.1-201ENST00000623415 1841 ntBASIC14.87□□□□□ -0.03
PHOX2BQ99453 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 RN7SL494P-201ENST00000461517 304 ntBASIC14.87□□□□□ -0.03
PHOX2BQ99453 ORAOV1P1-201ENST00000503108 395 ntBASIC14.87□□□□□ -0.03
PHOX2BQ99453 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC007326.1-201ENST00000604539 458 ntBASIC14.87□□□□□ -0.03
PHOX2BQ99453 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHOX2BQ99453 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.87□□□□□ -0.03
PHOX2BQ99453 AC110057.1-201ENST00000636031 898 ntBASIC14.87□□□□□ -0.03
PHOX2BQ99453 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms