Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AL603764.1-201ENST00000636452 321 ntBASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 TUBB8P4-201ENST00000511806 1324 ntBASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 AC004241.5-201ENST00000623870 2448 ntBASIC13.88□□□□□ -0.19
NSMCE2Q96MF7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AL365181.3-201ENST00000605886 3222 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 VDAC1P7-201ENST00000462417 847 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC069120.2-201ENST00000524091 540 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC131206.1-201ENST00000538078 1211 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 MIR3687-2-201ENST00000577708 61 ntBASIC13.87□□□□□ -0.19
NSMCE2Q96MF7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms