Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX27Q96L92 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX27Q96L92 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.74■□□□□ 0.11
SNX27Q96L92 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX27Q96L92 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC113367.3-201ENST00000508316 1912 ntBASIC15.73■□□□□ 0.11
SNX27Q96L92 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 SNX15-201ENST00000352068 771 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC239868.1-201ENST00000369385 493 ntBASIC15.73■□□□□ 0.11
SNX27Q96L92 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.73■□□□□ 0.11
SNX27Q96L92 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC012618.1-201ENST00000461223 412 ntBASIC15.73■□□□□ 0.11
SNX27Q96L92 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.73■□□□□ 0.11
SNX27Q96L92 AC124068.2-201ENST00000569473 1109 ntBASIC15.73■□□□□ 0.11
SNX27Q96L92 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.73■□□□□ 0.11
SNX27Q96L92 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SNX27Q96L92 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX27Q96L92 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX27Q96L92 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.72■□□□□ 0.11
SNX27Q96L92 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AL157792.1-201ENST00000488281 530 ntBASIC15.72■□□□□ 0.11
SNX27Q96L92 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.72■□□□□ 0.11
SNX27Q96L92 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 AF254983.2-201ENST00000612331 135 ntBASIC15.72■□□□□ 0.11
SNX27Q96L92 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.72■□□□□ 0.11
SNX27Q96L92 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SNX27Q96L92 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms