Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF3Q92576 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 AL157407.1-201ENST00000435784 904 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 AC012618.1-201ENST00000461223 412 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF3Q92576 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.2□□□□□ -0.3
PHF3Q92576 MIR4706-201ENST00000582134 82 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 AC008805.1-201ENST00000590892 364 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PHF3Q92576 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PHF3Q92576 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.19□□□□□ -0.3
PHF3Q92576 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 CEP164P1-201ENST00000455142 418 ntBASIC13.19□□□□□ -0.3
PHF3Q92576 TUBB8P8-201ENST00000458717 1058 ntBASIC13.19□□□□□ -0.3
PHF3Q92576 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PHF3Q92576 AP000346.4-201ENST00000614827 381 ntBASIC13.19□□□□□ -0.3
PHF3Q92576 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 CU633904.3-201ENST00000624042 1029 ntBASIC13.19□□□□□ -0.3
PHF3Q92576 MBLAC2-202ENST00000514906 1936 ntBASIC13.19□□□□□ -0.3
PHF3Q92576 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF3Q92576 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF3Q92576 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.18□□□□□ -0.3
PHF3Q92576 AL133466.1-201ENST00000447582 150 ntBASIC13.18□□□□□ -0.3
PHF3Q92576 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF3Q92576 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF3Q92576 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.18□□□□□ -0.3
PHF3Q92576 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.18□□□□□ -0.3
PHF3Q92576 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF3Q92576 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 E2F3P2-201ENST00000447755 1422 ntBASIC13.18□□□□□ -0.3
PHF3Q92576 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PHF3Q92576 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.18□□□□□ -0.3
PHF3Q92576 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF3Q92576 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF3Q92576 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF3Q92576 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms