Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AL591122.2-201ENST00000624125 1853 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AL162727.3-201ENST00000635661 2787 ntBASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ACTG1P19-201ENST00000418987 1116 ntBASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 SCARNA12-201ENST00000459155 270 ntBASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 PGAM1P12-201ENST00000505622 748 ntBASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD4Q5XG99 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AQP7P5-201ENST00000428759 1049 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 KRT17P4-201ENST00000429445 819 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AQP7P4-201ENST00000447083 1042 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AQP7P2-201ENST00000453967 1041 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 RN7SL767P-201ENST00000493013 295 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 FAM86B3P-203ENST00000523992 854 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms