Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
USH1GQ495M9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.76■□□□□ 0.27
USH1GQ495M9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 PDIA3P2-201ENST00000428073 158 ntBASIC16.76■□□□□ 0.27
USH1GQ495M9 XBP1P1-201ENST00000436573 652 ntBASIC16.76■□□□□ 0.27
USH1GQ495M9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC020922.3-201ENST00000595064 547 ntBASIC16.76■□□□□ 0.27
USH1GQ495M9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.76■□□□□ 0.27
USH1GQ495M9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
USH1GQ495M9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.76■□□□□ 0.27
USH1GQ495M9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.75■□□□□ 0.27
USH1GQ495M9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 OR2R1P-201ENST00000441404 914 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 RN7SL769P-201ENST00000469386 295 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 AC134698.3-201ENST00000523880 214 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.75■□□□□ 0.27
USH1GQ495M9 AC027237.1-201ENST00000560942 655 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 AC015967.2-201ENST00000624092 234 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 AC006435.4-201ENST00000625037 234 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 AL356737.1-201ENST00000634391 234 ntBASIC16.75■□□□□ 0.27
USH1GQ495M9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.75■□□□□ 0.27
USH1GQ495M9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
USH1GQ495M9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.75■□□□□ 0.27
USH1GQ495M9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
USH1GQ495M9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms