Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 LRRC59-203ENST00000576448 1531 ntBASIC10.51□□□□□ -0.73
UBE2D3P61077 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UBE2D3P61077 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
UBE2D3P61077 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D3P61077 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UBE2D3P61077 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2D3P61077 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D3P61077 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D3P61077 AC004241.5-201ENST00000623870 2448 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 SALL4P5-201ENST00000419001 1760 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D3P61077 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D3P61077 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D3P61077 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D3P61077 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 TMEM198B-204ENST00000484016 896 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.5□□□□□ -0.73
UBE2D3P61077 AL359711.2-201ENST00000563105 872 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 NAA60-208ENST00000570819 833 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D3P61077 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 AP005019.2-201ENST00000615104 511 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.5□□□□□ -0.73
UBE2D3P61077 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D3P61077 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D3P61077 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 AL391825.1-201ENST00000457671 1364 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.5□□□□□ -0.73
UBE2D3P61077 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D3P61077 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D3P61077 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms