Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VSX2P58304 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
VSX2P58304 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VSX2P58304 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.06□□□□□ -0.16
VSX2P58304 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.06□□□□□ -0.16
VSX2P58304 AC126915.1-201ENST00000522847 1038 ntBASIC14.06□□□□□ -0.16
VSX2P58304 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 AL023803.2-201ENST00000620080 638 ntBASIC14.06□□□□□ -0.16
VSX2P58304 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VSX2P58304 AC020907.1-201ENST00000616460 1350 ntBASIC14.06□□□□□ -0.16
VSX2P58304 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 MIR1247-201ENST00000408206 136 ntBASIC14.05□□□□□ -0.16
VSX2P58304 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.05□□□□□ -0.16
VSX2P58304 KLF2P1-201ENST00000447438 1042 ntBASIC14.05□□□□□ -0.16
VSX2P58304 AC004898.1-201ENST00000451057 766 ntBASIC14.05□□□□□ -0.16
VSX2P58304 TUBB8P8-201ENST00000458717 1058 ntBASIC14.05□□□□□ -0.16
VSX2P58304 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.05□□□□□ -0.16
VSX2P58304 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.05□□□□□ -0.16
VSX2P58304 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.05□□□□□ -0.16
VSX2P58304 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 AC244093.1-201ENST00000610837 814 ntBASIC14.05□□□□□ -0.16
VSX2P58304 MIR6720-201ENST00000611664 98 ntBASIC14.05□□□□□ -0.16
VSX2P58304 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VSX2P58304 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VSX2P58304 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 AC006504.5-208ENST00000588784 2401 ntBASIC14.05□□□□□ -0.16
VSX2P58304 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VSX2P58304 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VSX2P58304 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.05□□□□□ -0.16
VSX2P58304 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms