Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.92□□□□□ -0.02
CDH4P55283 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH4P55283 HIST2H2BC-201ENST00000498492 580 ntBASIC14.92□□□□□ -0.02
CDH4P55283 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH4P55283 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 PGAM1P5-201ENST00000548011 764 ntBASIC14.92□□□□□ -0.02
CDH4P55283 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH4P55283 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH4P55283 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 AC068418.2-201ENST00000577309 3703 ntBASIC14.92□□□□□ -0.02
CDH4P55283 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH4P55283 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH4P55283 AC064801.2-201ENST00000625052 1303 ntBASIC14.92□□□□□ -0.02
CDH4P55283 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH4P55283 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH4P55283 AC022494.1-201ENST00000466044 728 ntBASIC14.91□□□□□ -0.02
CDH4P55283 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH4P55283 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH4P55283 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH4P55283 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.91□□□□□ -0.02
CDH4P55283 AC092299.1-201ENST00000632679 757 ntBASIC14.91□□□□□ -0.02
CDH4P55283 AL139099.5-201ENST00000635274 300 ntBASIC14.91□□□□□ -0.02
CDH4P55283 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH4P55283 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CDH4P55283 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH4P55283 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH4P55283 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH4P55283 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH4P55283 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH4P55283 AC021016.3-201ENST00000608367 477 ntBASIC14.9□□□□□ -0.02
CDH4P55283 AC104506.1-201ENST00000609247 429 ntBASIC14.9□□□□□ -0.02
CDH4P55283 AC091544.8-201ENST00000619490 361 ntBASIC14.9□□□□□ -0.02
CDH4P55283 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms