Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC005840.4-201ENST00000541242 2494 ntBASIC14.77□□□□□ -0.04
CHRNA4P43681 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHRNA4P43681 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHRNA4P43681 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
CHRNA4P43681 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CHRNA4P43681 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CHRNA4P43681 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHRNA4P43681 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA4P43681 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHRNA4P43681 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHRNA4P43681 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA4P43681 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA4P43681 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRNA4P43681 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.77□□□□□ -0.05
CHRNA4P43681 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.77□□□□□ -0.05
CHRNA4P43681 YBX1P6-201ENST00000442962 1002 ntBASIC14.77□□□□□ -0.05
CHRNA4P43681 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA4P43681 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA4P43681 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 AC008825.2-201ENST00000603374 718 ntBASIC14.77□□□□□ -0.05
CHRNA4P43681 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CHRNA4P43681 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRNA4P43681 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CHRNA4P43681 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA4P43681 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 AC020910.6-201ENST00000623084 1459 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHRNA4P43681 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHRNA4P43681 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 ATP5G2P4-201ENST00000442175 420 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 KLF2P1-201ENST00000447438 1042 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNA4P43681 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 DUX4L46-201ENST00000566845 751 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 AC132192.2-201ENST00000596206 1147 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 AC009955.4-201ENST00000597192 544 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms