Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 AL590440.2-201ENST00000641973 1595 ntBASIC12.99□□□□□ -0.33
MSR1P21757 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 AC117489.1-201ENST00000625169 3217 ntBASIC12.99□□□□□ -0.33
MSR1P21757 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 AL136309.1-201ENST00000403917 691 ntBASIC12.99□□□□□ -0.33
MSR1P21757 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.99□□□□□ -0.33
MSR1P21757 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.99□□□□□ -0.33
MSR1P21757 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.99□□□□□ -0.33
MSR1P21757 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 AC215219.1-201ENST00000400706 1817 ntBASIC12.99□□□□□ -0.33
MSR1P21757 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 RN7SL832P-201ENST00000607781 1756 ntBASIC12.99□□□□□ -0.33
MSR1P21757 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
MSR1P21757 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.98□□□□□ -0.33
MSR1P21757 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
MSR1P21757 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
MSR1P21757 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 AC006001.1-201ENST00000325130 474 ntBASIC12.98□□□□□ -0.33
MSR1P21757 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 BOLA2P3-201ENST00000404566 256 ntBASIC12.98□□□□□ -0.33
MSR1P21757 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.98□□□□□ -0.33
MSR1P21757 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 AP003171.2-201ENST00000528208 925 ntBASIC12.98□□□□□ -0.33
MSR1P21757 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.98□□□□□ -0.33
MSR1P21757 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 ZACNP1-201ENST00000612259 710 ntBASIC12.98□□□□□ -0.33
MSR1P21757 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 RHOXF1P1-202ENST00000635473 501 ntBASIC12.98□□□□□ -0.33
MSR1P21757 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
MSR1P21757 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MSR1P21757 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.98□□□□□ -0.33
MSR1P21757 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms