Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
NTF3P20783 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 KRT18P2-201ENST00000447938 1258 ntBASIC11.22□□□□□ -0.61
NTF3P20783 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.22□□□□□ -0.61
NTF3P20783 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.22□□□□□ -0.61
NTF3P20783 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.22□□□□□ -0.61
NTF3P20783 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.22□□□□□ -0.61
NTF3P20783 CSPG4P13-202ENST00000567704 4801 ntBASIC11.22□□□□□ -0.61
NTF3P20783 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.22□□□□□ -0.61
NTF3P20783 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
NTF3P20783 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 AC111170.3-201ENST00000624282 2464 ntBASIC11.22□□□□□ -0.61
NTF3P20783 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NTF3P20783 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 AP3S2-216ENST00000617003 1561 ntBASIC11.21□□□□□ -0.61
NTF3P20783 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
NTF3P20783 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
NTF3P20783 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
NTF3P20783 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 AL355306.1-201ENST00000415580 579 ntBASIC11.21□□□□□ -0.61
NTF3P20783 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 AC079781.3-201ENST00000449110 356 ntBASIC11.21□□□□□ -0.61
NTF3P20783 RN7SL589P-201ENST00000481268 310 ntBASIC11.21□□□□□ -0.61
NTF3P20783 AC022447.6-201ENST00000515522 438 ntBASIC11.21□□□□□ -0.61
NTF3P20783 IGHV3-62-201ENST00000520057 340 ntBASIC11.21□□□□□ -0.61
NTF3P20783 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.21□□□□□ -0.61
NTF3P20783 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.21□□□□□ -0.61
NTF3P20783 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
NTF3P20783 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.21□□□□□ -0.61
NTF3P20783 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.21□□□□□ -0.62
NTF3P20783 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.21□□□□□ -0.62
NTF3P20783 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NTF3P20783 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms