Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.4■□□□□ 0.06
RARAP10276 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 AC105206.1-202ENST00000314927 2368 ntBASIC15.4■□□□□ 0.06
RARAP10276 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.4■□□□□ 0.06
RARAP10276 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 AC139712.1-201ENST00000378256 1875 ntBASIC15.4■□□□□ 0.06
RARAP10276 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.39■□□□□ 0.06
RARAP10276 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 PPT1-213ENST00000641319 2388 ntBASIC15.39■□□□□ 0.05
RARAP10276 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.39■□□□□ 0.05
RARAP10276 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RARAP10276 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 AL035633.1-201ENST00000406139 838 ntBASIC15.39■□□□□ 0.05
RARAP10276 AC004945.1-201ENST00000416738 983 ntBASIC15.39■□□□□ 0.05
RARAP10276 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 FAM8A4P-201ENST00000435433 1213 ntBASIC15.39■□□□□ 0.05
RARAP10276 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.39■□□□□ 0.05
RARAP10276 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.39■□□□□ 0.05
RARAP10276 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.39■□□□□ 0.05
RARAP10276 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RARAP10276 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RARAP10276 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RARAP10276 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RARAP10276 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 CD8B2-202ENST00000417670 633 ntBASIC15.38■□□□□ 0.05
RARAP10276 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.38■□□□□ 0.05
RARAP10276 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.38■□□□□ 0.05
RARAP10276 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 KRT90P-201ENST00000549264 1064 ntBASIC15.38■□□□□ 0.05
RARAP10276 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.38■□□□□ 0.05
RARAP10276 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RARAP10276 AC006453.4-201ENST00000636949 1252 ntBASIC15.38■□□□□ 0.05
RARAP10276 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 KHSRPP1-201ENST00000427983 1768 ntBASIC15.38■□□□□ 0.05
RARAP10276 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 375.8 ms