Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 AC215219.1-201ENST00000400706 1817 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
MT-ND1P03886 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
MT-ND1P03886 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.9□□□□□ -0.18
MT-ND1P03886 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.9□□□□□ -0.18
MT-ND1P03886 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 AC009407.1-201ENST00000568958 598 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.9□□□□□ -0.18
MT-ND1P03886 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.9□□□□□ -0.18
MT-ND1P03886 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 AC114271.1-201ENST00000612689 2813 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 AC090643.2-201ENST00000623442 2029 ntBASIC13.9□□□□□ -0.18
MT-ND1P03886 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.19
MT-ND1P03886 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
MT-ND1P03886 KRT18P28-201ENST00000453838 1332 ntBASIC13.9□□□□□ -0.19
MT-ND1P03886 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.89□□□□□ -0.19
MT-ND1P03886 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.89□□□□□ -0.19
MT-ND1P03886 DUX4L27-201ENST00000554796 1261 ntBASIC13.89□□□□□ -0.19
MT-ND1P03886 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
MT-ND1P03886 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 AL391069.4-201ENST00000609583 481 ntBASIC13.89□□□□□ -0.19
MT-ND1P03886 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.89□□□□□ -0.19
MT-ND1P03886 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 LINC02486-201ENST00000604157 3000 ntBASIC13.89□□□□□ -0.19
MT-ND1P03886 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 PEG13-201ENST00000631594 5667 ntBASIC13.89□□□□□ -0.19
MT-ND1P03886 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.89□□□□□ -0.19
MT-ND1P03886 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MT-ND1P03886 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms