Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CPNE6O95741 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CPNE6O95741 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE6O95741 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE6O95741 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE6O95741 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE6O95741 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.43□□□□□ -0.1
CPNE6O95741 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE6O95741 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE6O95741 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CPNE6O95741 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CPNE6O95741 AC011742.3-201ENST00000439053 820 ntBASIC14.42□□□□□ -0.1
CPNE6O95741 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE6O95741 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 UPF3AP2-201ENST00000457924 1132 ntBASIC14.42□□□□□ -0.1
CPNE6O95741 RNA5SP423-201ENST00000517127 109 ntBASIC14.42□□□□□ -0.1
CPNE6O95741 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 RN7SL163P-201ENST00000583100 276 ntBASIC14.42□□□□□ -0.1
CPNE6O95741 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE6O95741 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.42□□□□□ -0.1
CPNE6O95741 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE6O95741 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CPNE6O95741 AC022748.3-201ENST00000621828 275 ntBASIC14.42□□□□□ -0.1
CPNE6O95741 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE6O95741 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CPNE6O95741 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE6O95741 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE6O95741 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CPNE6O95741 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE6O95741 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE6O95741 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE6O95741 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE6O95741 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CPNE6O95741 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE6O95741 DPM3-202ENST00000368399 517 ntBASIC14.41□□□□□ -0.1
CPNE6O95741 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.41□□□□□ -0.1
CPNE6O95741 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE6O95741 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE6O95741 CYP46A4P-201ENST00000414953 267 ntBASIC14.41□□□□□ -0.1
CPNE6O95741 RNMTL1P1-201ENST00000454103 560 ntBASIC14.41□□□□□ -0.1
CPNE6O95741 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE6O95741 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE6O95741 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms