Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CLN5O75503 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.09□□□□□ -0.47
CLN5O75503 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CLN5O75503 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLN5O75503 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLN5O75503 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.08□□□□□ -0.47
CLN5O75503 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.08□□□□□ -0.47
CLN5O75503 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLN5O75503 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CLN5O75503 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.08□□□□□ -0.47
CLN5O75503 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.08□□□□□ -0.47
CLN5O75503 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CLN5O75503 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.08□□□□□ -0.47
CLN5O75503 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
CLN5O75503 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLN5O75503 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CLN5O75503 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CLN5O75503 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.08□□□□□ -0.48
CLN5O75503 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 KRT18P64-201ENST00000434946 1219 ntBASIC12.08□□□□□ -0.48
CLN5O75503 RPL13P2-201ENST00000440687 659 ntBASIC12.08□□□□□ -0.48
CLN5O75503 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.08□□□□□ -0.48
CLN5O75503 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CLN5O75503 KRT18P43-201ENST00000469825 1281 ntBASIC12.08□□□□□ -0.48
CLN5O75503 HLA-J-203ENST00000494367 1087 ntBASIC12.08□□□□□ -0.48
CLN5O75503 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.08□□□□□ -0.48
CLN5O75503 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC074044.1-201ENST00000609673 707 ntBASIC12.08□□□□□ -0.48
CLN5O75503 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CLN5O75503 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.08□□□□□ -0.48
CLN5O75503 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 AC012508.2-201ENST00000567613 1472 ntBASIC12.08□□□□□ -0.48
CLN5O75503 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLN5O75503 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.08□□□□□ -0.48
CLN5O75503 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CLN5O75503 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 AP001267.2-201ENST00000532619 2086 ntBASIC12.07□□□□□ -0.48
CLN5O75503 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.07□□□□□ -0.48
CLN5O75503 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLN5O75503 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.07□□□□□ -0.48
CLN5O75503 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CLN5O75503 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms