Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18■□□□□ 0.47
CACNA1FO60840 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18■□□□□ 0.47
CACNA1FO60840 NOC2LP1-201ENST00000450578 752 ntBASIC18■□□□□ 0.47
CACNA1FO60840 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18■□□□□ 0.47
CACNA1FO60840 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18■□□□□ 0.47
CACNA1FO60840 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18■□□□□ 0.47
CACNA1FO60840 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CACNA1FO60840 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18■□□□□ 0.47
CACNA1FO60840 AC009560.1-201ENST00000620208 434 ntBASIC18■□□□□ 0.47
CACNA1FO60840 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CACNA1FO60840 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18■□□□□ 0.47
CACNA1FO60840 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.99■□□□□ 0.47
CACNA1FO60840 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.99■□□□□ 0.47
CACNA1FO60840 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.99■□□□□ 0.47
CACNA1FO60840 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.99■□□□□ 0.47
CACNA1FO60840 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.99■□□□□ 0.47
CACNA1FO60840 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 KRT8P24-201ENST00000560290 1559 ntBASIC17.99■□□□□ 0.47
CACNA1FO60840 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.99■□□□□ 0.47
CACNA1FO60840 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC019193.1-201ENST00000506678 823 ntBASIC17.99■□□□□ 0.47
CACNA1FO60840 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC016629.1-201ENST00000596579 586 ntBASIC17.99■□□□□ 0.47
CACNA1FO60840 AC084781.1-201ENST00000613737 656 ntBASIC17.99■□□□□ 0.47
CACNA1FO60840 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CACNA1FO60840 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.99■□□□□ 0.47
CACNA1FO60840 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.98■□□□□ 0.47
CACNA1FO60840 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
CACNA1FO60840 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.98■□□□□ 0.47
CACNA1FO60840 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CACNA1FO60840 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.98■□□□□ 0.47
CACNA1FO60840 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CACNA1FO60840 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.98■□□□□ 0.47
CACNA1FO60840 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CACNA1FO60840 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.98■□□□□ 0.47
CACNA1FO60840 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.97■□□□□ 0.47
CACNA1FO60840 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CACNA1FO60840 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 SNORA50C-201ENST00000408535 133 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.97■□□□□ 0.47
CACNA1FO60840 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 SNORA50.1-201ENST00000628590 135 ntBASIC17.97■□□□□ 0.47
CACNA1FO60840 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CACNA1FO60840 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.97■□□□□ 0.47
CACNA1FO60840 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CACNA1FO60840 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms