Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AL589739.1-201ENST00000607720 493 ntBASIC13.91□□□□□ -0.18
AP4S1Q9Y587 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 SALL4P5-201ENST00000419001 1760 ntBASIC13.91□□□□□ -0.18
AP4S1Q9Y587 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP4S1Q9Y587 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 TUBB8P4-201ENST00000511806 1324 ntBASIC13.9□□□□□ -0.18
AP4S1Q9Y587 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 AL080243.2-201ENST00000418783 582 ntBASIC13.9□□□□□ -0.18
AP4S1Q9Y587 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 AC005237.2-201ENST00000434368 219 ntBASIC13.9□□□□□ -0.18
AP4S1Q9Y587 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.9□□□□□ -0.18
AP4S1Q9Y587 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP4S1Q9Y587 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP4S1Q9Y587 HLA-A-201ENST00000376802 1334 ntBASIC13.9□□□□□ -0.19
AP4S1Q9Y587 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms