Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 HMGN1P19-201ENST00000436976 333 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 CRB3P1-201ENST00000449338 276 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 AC092364.2-202ENST00000597012 1073 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 AL603764.1-201ENST00000636452 321 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 CICP16-201ENST00000502609 2813 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 MSTO2P-201ENST00000314835 1709 ntBASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RHBDD3Q9Y3P4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 KRT8P24-201ENST00000560290 1559 ntBASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 AC022137.2-201ENST00000503482 481 ntBASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RHBDD3Q9Y3P4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms