Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS5Q9UPZ3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.39■□□□□ 0.38
HPS5Q9UPZ3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPS5Q9UPZ3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
HPS5Q9UPZ3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AP000356.3-201ENST00000382243 753 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 PUDPP3-201ENST00000445368 636 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AC022447.6-201ENST00000515522 438 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 MTND2P7-201ENST00000521337 640 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 C2orf69P1-201ENST00000563532 1093 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AC138894.2-201ENST00000602838 371 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 BX088702.1-201ENST00000610784 235 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AL132780.4-201ENST00000624870 1135 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 AC092135.3-201ENST00000624151 1846 ntBASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPS5Q9UPZ3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 AL136379.1-201ENST00000623471 2642 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 RN7SKP214-201ENST00000364208 315 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 MIR4683-201ENST00000579659 81 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 RN7SL275P-201ENST00000582762 335 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 AC090164.2-201ENST00000611487 516 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 AL136295.7-201ENST00000619226 1200 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 MRPL37P1-201ENST00000592451 1337 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 AL136172.1-201ENST00000598590 1394 ntBASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS5Q9UPZ3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS5Q9UPZ3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS5Q9UPZ3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS5Q9UPZ3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS5Q9UPZ3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS5Q9UPZ3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms