Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RIMS3Q9UJD0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AC093525.8-201ENST00000624099 1342 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 DRD5P1-201ENST00000456605 1438 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AL589987.1-201ENST00000453380 819 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 IGHV3-42-201ENST00000520410 361 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 SRD5A3P1-201ENST00000603021 949 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AL023775.1-201ENST00000454907 1746 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 MKRN5P-201ENST00000445263 1467 ntBASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIMS3Q9UJD0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 AL158070.2-201ENST00000623713 1621 ntBASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 AC136604.1-202ENST00000425471 771 ntBASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 AL353779.1-201ENST00000434793 351 ntBASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms