Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC234783.1-201ENST00000441761 496 ntBASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 TTTY23B-201ENST00000442790 549 ntBASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 RPSAP52-203ENST00000622976 1023 ntBASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 AC020910.6-201ENST00000623084 1459 ntBASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 KHSRPP1-201ENST00000427983 1768 ntBASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 TPM3P8-201ENST00000330554 643 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC005229.1-201ENST00000392885 409 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC079776.1-201ENST00000401540 1152 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 PUDPP3-201ENST00000445368 636 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC092658.1-201ENST00000505836 891 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC106760.1-201ENST00000508690 800 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC132938.4-201ENST00000623835 848 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC020910.5-201ENST00000623668 1865 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 AC011474.4-201ENST00000623523 2076 ntBASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NEUROD4Q9HD90 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NEUROD4Q9HD90 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NEUROD4Q9HD90 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NEUROD4Q9HD90 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.9□□□□□ -0.19
NEUROD4Q9HD90 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms