Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 AF238378.1-201ENST00000526806 358 ntBASIC11.92□□□□□ -0.5
NKX6-2Q9C056 HNRNPUP1-201ENST00000554987 333 ntBASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AL136982.4-201ENST00000437689 1740 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AC092139.4-201ENST00000624318 2794 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AP002414.3-201ENST00000589352 1468 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 AL645728.2-202ENST00000641679 227 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 REXO1L4P-201ENST00000605109 1937 ntBASIC11.91□□□□□ -0.5
NKX6-2Q9C056 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms