Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 GRPEL2P1-201ENST00000453145 339 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 SNORD3B-1-201ENST00000577988 758 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC055811.3-201ENST00000584952 686 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AL672207.1-201ENST00000328462 1570 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 AC215219.1-201ENST00000400706 1817 ntBASIC18.66■□□□□ 0.58
PCDH11YQ9BZA8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 AC018529.2-202ENST00000611482 3087 ntBASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 AC019109.1-201ENST00000401725 1874 ntBASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11YQ9BZA8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11YQ9BZA8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11YQ9BZA8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11YQ9BZA8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11YQ9BZA8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 AC022532.1-201ENST00000624563 1728 ntBASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 KRT17P4-201ENST00000429445 819 ntBASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 RN7SL494P-201ENST00000461517 304 ntBASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 AJ011931.1-201ENST00000618749 2492 ntBASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms