Protein–RNA interactions for Protein: Q9BWT1

CDCA7, Cell division cycle-associated protein 7, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7Q9BWT1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC092612.1-201ENST00000514501 998 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC132825.4-202ENST00000578792 434 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 RN7SL121P-201ENST00000584223 273 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC005274.1-201ENST00000623460 802 ntBASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA7Q9BWT1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AL590235.1-201ENST00000564650 861 ntBASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA7Q9BWT1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 AC007952.5-201ENST00000572818 1486 ntBASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA7Q9BWT1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms