Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC019294.4-201ENST00000561777 2905 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC007787.1-201ENST00000588095 1583 ntBASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
AP1S3Q96PC3 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC106818.1-201ENST00000623223 3242 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 REXO1L4P-201ENST00000605109 1937 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MED15P5-201ENST00000423150 992 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC243562.1-201ENST00000560672 389 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AL645728.2-202ENST00000641679 227 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC138969.3-201ENST00000546612 1459 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC138932.2-201ENST00000548268 1459 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC126755.4-201ENST00000549796 1459 ntBASIC11.18□□□□□ -0.62
AP1S3Q96PC3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
AP1S3Q96PC3 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms