Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 DUX4L50-201ENST00000455245 715 ntBASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC079328.1-201ENST00000560358 952 ntBASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC016629.1-201ENST00000596579 586 ntBASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 TBC1D3J-201ENST00000620719 1426 ntBASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 AC232323.1-201ENST00000540724 2099 ntBASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD1Q8NHV4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC097359.2-201ENST00000604992 2389 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC067930.6-201ENST00000623257 4947 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 RN7SL277P-201ENST00000481521 288 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC008723.1-201ENST00000506922 207 ntBASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD1Q8NHV4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 LINC00552-201ENST00000625151 2579 ntBASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 RPS9P1-201ENST00000419943 583 ntBASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 RPSAP15-201ENST00000448168 861 ntBASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 RN7SL67P-201ENST00000492147 296 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms