Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11□□□□□ -0.65
NUP35Q8NFH5 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 UXT-AS1-201ENST00000590504 1525 ntBASIC11□□□□□ -0.65
NUP35Q8NFH5 PCDHA6-201ENST00000378126 3267 ntBASIC11□□□□□ -0.65
NUP35Q8NFH5 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 RPL13P2-201ENST00000440687 659 ntBASIC11□□□□□ -0.65
NUP35Q8NFH5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 IGHV3-22-201ENST00000520721 359 ntBASIC11□□□□□ -0.65
NUP35Q8NFH5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11□□□□□ -0.65
NUP35Q8NFH5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11□□□□□ -0.65
NUP35Q8NFH5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11□□□□□ -0.65
NUP35Q8NFH5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
NUP35Q8NFH5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11□□□□□ -0.65
NUP35Q8NFH5 AC012313.10-201ENST00000623509 926 ntBASIC11□□□□□ -0.65
NUP35Q8NFH5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11□□□□□ -0.65
NUP35Q8NFH5 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NUP35Q8NFH5 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11□□□□□ -0.65
NUP35Q8NFH5 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11□□□□□ -0.65
NUP35Q8NFH5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 AC015688.4-201ENST00000580780 1647 ntBASIC10.99□□□□□ -0.65
NUP35Q8NFH5 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 AL031284.1-201ENST00000419297 478 ntBASIC10.99□□□□□ -0.65
NUP35Q8NFH5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
NUP35Q8NFH5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms