Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AC009093.10-201ENST00000641956 1442 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AC087386.2-201ENST00000623212 4637 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 BX640514.1-201ENST00000583223 1918 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AC010141.1-201ENST00000411585 623 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AC079178.1-201ENST00000420915 656 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 MIR4683-201ENST00000579659 81 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 AL358472.3-201ENST00000608147 415 ntBASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRFBP1Q8NEF9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 AC079781.5-202ENST00000641784 3743 ntBASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 DUX4L45-201ENST00000566406 1057 ntBASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 AC239800.4-201ENST00000603712 296 ntBASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 MIR6775-201ENST00000617557 69 ntBASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 SHC1P1-201ENST00000425230 1745 ntBASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms