Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 PCDHA3-202ENST00000532566 4594 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 BX640514.1-201ENST00000583223 1918 ntBASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ARHGEF39Q8N4T4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 MIR3619-201ENST00000579667 83 ntBASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.75□□□□□ -0.21
ARHGEF39Q8N4T4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms