Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC027612.2-202ENST00000445955 1199 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AL031673.1-201ENST00000611460 466 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC010531.8-201ENST00000623341 685 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC018529.2-202ENST00000611482 3087 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 EEF1DP5-201ENST00000431410 772 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 VENTXP4-201ENST00000449029 958 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLX4Q8IY92 AC139713.2-207ENST00000641556 1292 ntBASIC17.31■□□□□ 0.36
SLX4Q8IY92 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.31■□□□□ 0.36
SLX4Q8IY92 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 AC007952.5-201ENST00000572818 1486 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 ABCD1P4-201ENST00000399687 604 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 ZNF877P-201ENST00000437614 612 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 MIR4746-201ENST00000579802 71 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.3■□□□□ 0.36
SLX4Q8IY92 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.3■□□□□ 0.36
SLX4Q8IY92 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLX4Q8IY92 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 AC015909.5-201ENST00000624336 2266 ntBASIC17.29■□□□□ 0.36
SLX4Q8IY92 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLX4Q8IY92 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLX4Q8IY92 OR2W2P-201ENST00000406313 909 ntBASIC17.29■□□□□ 0.36
SLX4Q8IY92 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLX4Q8IY92 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLX4Q8IY92 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.29■□□□□ 0.36
SLX4Q8IY92 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms