Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VRK2Q86Y07 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VRK2Q86Y07 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.58□□□□□ -0.23
VRK2Q86Y07 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VRK2Q86Y07 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 FAM197Y7-201ENST00000432892 766 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 C2orf27AP3-201ENST00000434123 579 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 RN7SL692P-201ENST00000464677 288 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 FTH1P14-201ENST00000482930 551 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 ALG3P1-201ENST00000508806 1114 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 RNA5SP486-201ENST00000515961 83 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC132938.2-201ENST00000579188 680 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC027307.3-201ENST00000594262 1100 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC008735.3-201ENST00000596646 500 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AC244669.2-201ENST00000612320 853 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 AL354718.3-201ENST00000616414 581 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 CR382287.1-201ENST00000623954 586 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AL591163.1-201ENST00000641757 987 ntBASIC13.58□□□□□ -0.24
VRK2Q86Y07 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK2Q86Y07 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VRK2Q86Y07 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms