Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC114271.1-201ENST00000612689 2813 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC004241.5-201ENST00000623870 2448 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 KLF2P2-201ENST00000416807 1039 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TREML5P-201ENST00000421694 576 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TSEN15P1-201ENST00000423257 515 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC135586.1-201ENST00000539323 574 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC004466.1-201ENST00000599515 1080 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 AC139712.1-201ENST00000378256 1875 ntBASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRTM1Q86UE6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms